The company’s lead program is developing a series of tests for CRC. The strategy is multi-tiered with separate specialized plans for the US and European roll-outs. The company will be commercializing initially in Europe with the recently announced (September 2016) triage test strategy, a test targeting reducing colonoscopies within the scope of pre-existing state run CRC testing programs (see below). The triage test will begin commercialization in early 2017. Initial commercialization in the US will consist of a 510(k) approved test to be used as an adjunct to established CRC diagnoses, with an expected launch in late 2017 or early 2018. Following these initial entries into the market, the company will continue to develop and launch first-line diagnostic tests with the goal of providing a definitive diagnosis of CRC. These test aim to act as a replacement for established tests such as the fecal occluded blood test (FOBT) and FIT. Approval for a frontline test will require a PMA approval in the US, and the company expects to get feedback from the FDA on their regulatory path forward in H117. The company has three CE marks for different assays in Europe.
The market for CRC screening is large with approximately 225 million people in the US and Europe of screening age, and there is significant pressure to diagnose the disease early. Localized disease has a 90.1% five-year survival rate, which drops to 13.1% following metathesis. In the US the current recommendations are that adults aged 50 and older should be tested with one or more of the following to detect CRC:
■
flexible sigmoidoscopy every five years, with FOBT/FIT every three years; or
■
colonoscopy every 10 years.
Similarly in Europe there are multiple national initiatives to screen the at-risk population, for instance a FIT test distributed to at-risk individuals once every two years, as in Scotland. The problem with these strategies is that compliance for fecal testing is low (13-60% depending on the study) and, while highly accurate, colonoscopy is invasive and requires sedation. The Cologuard test developed by Exact Sciences has attempted to address some of the performance limitations of other fecal tests, and has significantly improved accuracy. However, the test still underperforms colonoscopy, and adoption was slow in its first full launch year, with only 104k tests sold in 2015.
Exhibit 2: Current CRC screening technology comparison
|
Sensitivity (%) |
False negative rate (%) |
Specificity (%) |
False positive rate (%) |
Cost per test ($) |
Number of tests in US annually (m) |
Negatives |
Colonoscopy |
95 |
5 |
95 |
5 |
$1,000-3,000 |
4.3 |
Invasive, adverse events, cost |
FOBT |
50 |
50 |
98 |
2 |
5 |
5.6 |
Fecal-based test, high false negative, accuracy depends on which specific FOBT variant used |
FIT |
68 |
32 |
97.4 |
2.6 |
23 |
4.6 |
Fecal-based test, high false negative |
Cologuard (Exact Sciences) |
92 |
8 |
87 |
13 |
649 |
0.1 |
Fecal-based test, high cost |
Source: FDA, World Gastroenterology Organisation, Exact Sciences, VolitionRx
The limitations of established testing technology have led to the development of an array of blood-based tests (Exhibit 3), which promise to lessen the burden on the patient and improve compliance. The majority of these tests have been promoted by small companies unable to support the large-scale clinical trials necessary for widespread adoption. An exception is Epi proColon (developed by Epigenomics) which was launched in April 2016 in the US after FDA approval for patients that are non-compliant with other testing methodologies. The test received approval from the FDA based on a screening study that compliance with testing increases when patients are given the option of blood-based testing. This result is significant because it provides a pathway for testing methodologies to reach approval that exhibit higher rates of false positives. The FDA initially rejected the Epi proColon application because estimates indicated that only a little over 2% of patients testing positive had CRC (compared to 16% of those with positive FIT), which presented both a burden on the patients on the medical system with the obligatory follow-up colonoscopies. However, the screening study showed that only 0.5% of patients were noncompliant with Epi proColon (compared to 12% for FIT), which would translate into improved overall outcomes.
NuQ has been evaluated in two separate trials for CRC. In a retrospective trial of 4,800 samples from patients presenting with CRC or other bowel diseases, the test showed 81% sensitivity to detecting CRC (at 78% specificity). This trial established the capacity of the test to identify patients with CRC, but had several limitations. Because all the patients included in the screen had a variety of bowel diseases, including polyps and adenomas, one would expect a higher degree of false positives than would be observed in the general population: it is a reasonable assumption that these patients would also have abnormal DNA expression and higher degrees of cell death. However, the test still performed in this background. A limitation is that the retrospective nature of the test limits the capacity to interpret the statistics of the study fairly. To this end, the company performed a prospective trial of 121 patients that were identified in CHU Dinant Godinne – UCL Namur University Hospital in Belgium with symptoms of CRC. In this study a panel of four NuQ assays identified CRC with 91% sensitivity and 90% specificity. These results, if repeatable, would make NuQ the best in class blood-based CRC diagnostic, but additional studies are needed because the number of CRC cases (23) and healthy subjects (20) was low in the sample, due to the large number of patients with other bowel diseases.
Exhibit 3: Blood-based screening tests for CRC
Test Name |
Company |
CRC sensitivity (%) |
False negative rate (%) |
Specificity (%) |
False positive rate (%) |
Cost per test ($) |
Method |
Availability |
Epi proColon |
Epigenomics |
72.2 |
27.8 |
80.8 |
19.2 |
141 |
Septin 9 |
CE mark in EU, FDA approved |
ColonSentry |
Gene News |
72 |
28 |
70 |
30 |
350 |
7 biomarkers |
CLIA in US |
ColoMarker |
EDP Biotech |
98 |
2 |
84 |
16 |
<100 |
CA11-19 |
CE mark in EU |
Colox |
Novigenix |
75 |
25 |
91 |
9 |
|
29 gene panel |
CE mark in EU |
EarlyTect Colon Cancer |
Genomic Tree |
87 |
13 |
95.2 |
4.8 |
|
SDC2 |
|
Cologic |
Phenomenome Discoveries |
86 |
14 |
90 |
10 |
75-95 |
GTA-446 |
Canada |
CC Detect |
Panacea Global |
99 |
1 |
91 |
9 |
200 |
HAAH |
CLIA in US |
ColoVantage |
Quest (license from Epigenomics) |
70 |
30 |
89 |
11 |
355 |
Septin 9 |
CLIA in US |
NuQ |
VolitionRx |
81-91 |
9-19 |
78-90 |
10-22 |
40-80 |
Nucleosome |
|
One of the distinguishing features of the NuQ CRC test is its ability to detect colorectal adenomas. Adenomas, also referred to as precancerous polyps, are benign growths on the lining of the bowel characterized by a dysregulation of normal cellular function. These growths almost universally precede the development of CRC and are a significant risk factor. A NuQ testing panel was able to identify 75% of adenomas among a population of 430 patients presenting with signs of bowel disease (specificity of 78%). Other blood and fecal-based tests do not detect adenomas with any viable degree of sensitivity (Exhibit 4).
Exhibit 4: Adenoma detection sensitivity
|
|
Source: VolitioRx, Epigenomics, Exact Sciences, Applied Proteomics. Note: FOBT = fecal occult blood test, FIT = fecal immunochemical test.
|
The company announced the strategy for the initial commercialization of NuQ for CRC screening in September 2016. It will be launching a test in Europe based on a single normalized CE-marked NuQ assay designed as a follow-up to a positive FIT. The test is not designed to diagnose cancer in the same way as the NuQ panels that have been previously reported, but instead is designed as a companion diagnostic used to rule out some patients that are not at risk to colon cancer. The name for the new test is the NuQ triage colorectal screening test.
The company developed this commercial plan after speaking with European authorities, who expressed the need for a tool to reduce colonoscopies, which are a significant burden on patients and the healthcare system of these countries. In many European jurisdictions (14 of the 28 EU member states), central health authorities have widespread CRC screening programs, where FIT or FOBT tests are distributed to the screening population on a regular basis. Given the high false positive rate of these tests, a large number of these must be followed up with a colonoscopy. The new triage test is meant as an intermediary step of this process where the patient will instead be sent to the doctor for a blood test following a positive FIT result. The company reported that the NuQ test could rule out up to 25% of patients with a positive FIT result that are not at risk for colon cancer, and therefore do not need a follow-up colonoscopy.
The triage test consist of a pair of assays (a diagnostic and a baseline), which is fewer than the panels of four or five tests being explored for the frontline diagnostic. The lower number of assays may translate into better pricing as well as lower the barriers to entry for the product as it will fit more seamlessly into existing blood testing protocols and require less interpretation.
The company will commercialize the triage test by approaching the central health authorities in countries that have established FIT testing protocols. Near-term targets include Belgium, France, Denmark, Scotland and the Republic of Ireland. England is testing a pilot FIT program and may become available as a market soon. The company will employ a small number representatives to pursue market access in these regions and these relationships will likely be leveraged when the frontline NuQ colorectal screening test enters the market.
The addressable market for the triage test is small compared to the frontline lest. There are approximately 136 million patients in Europe eligible for routine CRC screening. However, many fecal testing programs have historically had low compliance rates. A recent study of fecal testing in France found compliance rates between 47% and 54% over four consecutive two-year periods (24-27% tested per year). A study in Spain identified a FIT positivity rate of 7.2%, similar to rates observed in the US (7.0%). This corresponds to a total market of 2.5 million individuals per year across Europe if all nations adopted FIT screening programs, or a little over 1% of the predicted US and European frontline CRC screening market.
The company will be releasing more-detailed information about the specifics of the test at the ESMO meeting in October 2016.